PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098261.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 243aa MW: 27896.8 Da PI: 9.8206

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	1e-13	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd +l+++v+ +G g+W+ ++++ g+ R +k+c+ rw +yl XP_028098261.1 12 KGLWKPEEDIILKNYVEAHGEGNWANVSEKSGLMRGGKSCRMRWKNYL 59 678*******************************************97 PP
2	Myb_DNA-binding	52.8	9.1e-17	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr++ +E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_028098261.1 65 RGRMSDDEKDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAMKEGKSSI KKGLWKPEED IILKNYVEAH GEGNWANVSE KSGLMRGGKS CRMRWKNYLR 60 PNIKRGRMSD DEKDLIIRLH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL NKRSSQTKTT 120 TICSKNKKKL QQFPTSQPTR CKISENDDKR SQGRKVEDIT AVSPWIEHAR SFNFDTEPPL 180 FPANDALLFT DDEPFMPILD SLALYEALQS NGGEEYPQEV ARHATGLCYK GEVIPCPRSM 240 ARW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	9e-68	MYB family protein