PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098262.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 228aa MW: 26058.5 Da PI: 9.1472

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.2	9.1e-14	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd +l+++v+ +G g+W+ ++++ g+ R +k+c+ rw +yl XP_028098262.1 12 KGLWKPEEDIILKNYVEAHGEGNWANVSEKSGLMRGGKSCRMRWKNYL 59 678*******************************************97 PP
2	Myb_DNA-binding	50.9	3.5e-16	65	108	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rgr++ +E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_028098262.1 65 RGRMSDDEKDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNT 108 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MEMKEGKSSI KKGLWKPEED IILKNYVEAH GEGNWANVSE KSGLMRGGKS CRMRWKNYLR 60 PNIKRGRMSD DEKDLIIRLH KLLGNRWSLI AGRLPGRTDN EVKNYWNTRL NKRSSQTKTT 120 TICSKNKKKL QQFPTSQPTR CKISENDDER SQGRKGEDIT AVSPWIEHAR SFNFDTEPPL 180 FPANDALLFT DDEPFMPILD SLALYEALQS NGGEEYPQEV AGHATGLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	9e-68	MYB family protein