PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098584.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 265aa MW: 28957.9 Da PI: 8.7342

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.3e-12	75	121	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr l+P +K++Ka+ L +++ +k+L XP_028098584.1 75 KSHSEAERRRRERINAHLATLRGLVPCT-----EKMDKATLLAEVISQVKQL 121 58***********************8.....8**********999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MSLYSWKSSN SGFGSNCLGM FENLGGFSEN WGGGSMSLSQ SLVLDREGGE LVKTPPVRVG 60 KKSGASEEKV MAALKSHSEA ERRRRERINA HLATLRGLVP CTEKMDKATL LAEVISQVKQ 120 LKKTATESSK GLIIPMDADE VRVEPEPNTE GDKNISLRVS LCCDYRPELL SELKQALDAL 180 HLNMVKADIS TLGSRVKNVL VFTSRKDTNG DNAEACQLLV NSVHRALSSI IDKGAATTEY 240 SPRTTLPNKR RRISLFDSLS SSSQE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	86	ERRRRE
2	249	253	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	1e-31	bHLH family protein