PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098699.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 552aa MW: 60907.2 Da PI: 4.8426

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	366	408	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_028098699.1 366 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 408 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MRPRANNGMG WMEGEEDDAV SWSRNNNNHE GETTDADLNH PSLSTFKSFL ESDWYMNNAI 60 IMNPDFQTIP EFKDMNMNMN MTFSSSSSSS NPPTTVPADN LLLQQPKPMD SSSSCSPSQT 120 FNFDPSLSHP FLPPPSSCFS SLFNVVCNNN NNPFENGFDL GCDTNFLENH NCNSPMLMGF 180 NGPSWSSSEF PATRLVQISD NNAAIGFEGS SSGDGDAPFL NRSKVLRPPE ILQPVGTQPT 240 LFQKRAALRQ SSAAGAINLG NLDLRKSTEV SARADGNWGK RLDDGELKKK RKINDEDEFE 300 EASIDASGLN YDSSDEPFEN KVVESEDTNN GGNNNSNANT TVTTVVVGDD QKEKGKKKGL 360 PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIEYLKELLQ RINDLHNELE 420 ATPLAPGSLL PLPPTSSFHP LTPTPPTLPY RIKEELCPSS LPSPKNQPAR VEVRVREGRA 480 VNIHMFCARR PGLLLSTMRA LDNLGLDIQQ AVISCFNGFA LDVFIAEQCR EGLEVVPEQI 540 KAVLLDSAGF QL

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MRPRANNGMG WMEGEEDDAV SWSRNNNNHE GETTDADLNH PSLSTFKSFL ESDWYMNNAI  60
IMNPDFQTIP EFKDMNMNMN MTFSSSSSSS NPPTTVPADN LLLQQPKPMD SSSSCSPSQT  120
FNFDPSLSHP FLPPPSSCFS SLFNVVCNNN NNPFENGFDL GCDTNFLENH NCNSPMLMGF  180
NGPSWSSSEF PATRLVQISD NNAAIGFEGS SSGDGDAPFL NRSKVLRPPE ILQPVGTQPT  240
LFQKRAALRQ SSAAGAINLG NLDLRKSTEV SARADGNWGK RLDDGELKKK RKINDEDEFE  300
EASIDASGLN YDSSDEPFEN KVVESEDTNN GGNNNSNANT TVTTVVVGDD QKEKGKKKGL  360
PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIEYLKELLQ RINDLHNELE  420
ATPLAPGSLL PLPPTSSFHP LTPTPPTLPY RIKEELCPSS LPSPKNQPAR VEVRVREGRA  480
VNIHMFCARR PGLLLSTMRA LDNLGLDIQQ AVISCFNGFA LDVFIAEQCR EGLEVVPEQI  540
KAVLLDSAGF QL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	356	374	KKKGLPAKNLMAERRRRKK
2	368	375	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-101	bHLH family protein