PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098738.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 346aa MW: 38576.3 Da PI: 6.7339

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.5	8.6e-20	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_028098738.1 13 KGPWTPEEDQKLVDYIHKHGHGSWRALPNLAGLNRCGKSCRLRWTNYL 60 79********************************************97 PP
2	Myb_DNA-binding	55.1	1.7e-17	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_028098738.1 66 RGKFSQEEEQTILHLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 111 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRSPSDENG LKKGPWTPEE DQKLVDYIHK HGHGSWRALP NLAGLNRCGK SCRLRWTNYL 60 RPDIKRGKFS QEEEQTILHL HSILGNKWSA IATHLPGRTD NEIKNFWNTH LKKKLIQMGF 120 DPMTHRPRTD LFATLPHLIA LANLRELIDQ PPLEQEAVKL QAEAIQLAKI QYLQHLIQSS 180 ASSHIQNNIT DIENLSLLNS MPPIKENPFL NSTQVLQNQA LFGIENATSQ PLHYPIMNSS 240 SDPQVPFNFQ TPLNSEMGQG INNATIMISQ GDDHNHNHNN PPHSPWILPS PSSSSGHRLP 300 MLSESLVSNP GDASSSSSHG GGGGGDGSSS YWPELLFDES FMHEIC

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRSPSDENG LKKGPWTPEE DQKLVDYIHK HGHGSWRALP NLAGLNRCGK SCRLRWTNYL  60
RPDIKRGKFS QEEEQTILHL HSILGNKWSA IATHLPGRTD NEIKNFWNTH LKKKLIQMGF  120
DPMTHRPRTD LFATLPHLIA LANLRELIDQ PPLEQEAVKL QAEAIQLAKI QYLQHLIQSS  180
ASSHIQNNIT DIENLSLLNS MPPIKENPFL NSTQVLQNQA LFGIENATSQ PLHYPIMNSS  240
SDPQVPFNFQ TPLNSEMGQG INNATIMISQ GDDHNHNHNN PPHSPWILPS PSSSSGHRLP  300
MLSESLVSNP GDASSSSSHG GGGGGDGSSS YWPELLFDES FMHEIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-113	MYB family protein