PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028098822.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 172aa    MW: 19165.9 Da    PI: 10.245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028098822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-09117166455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +   ++   + Ka +L + ++Y++sLq
  XP_028098822.1 117 SHSLAERVRREKISERMKLLQDLVPGC---NKMCvNGKALMLDEIINYVQSLQ 166
                     79************************8...5555599***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MVLPRVSSSP SIKAAVSPVG VQENKNSTQT QMEMRSSIGS DTKFRKVLES ATSDRTEFAS  60
SNEGSSVSRK IPNGETVLKN PILSMPQCRE TKANQKPPEP PKDYIHVRAR RGQAIDSHSL  120
AERVRREKIS ERMKLLQDLV PGCNKMCVNG KALMLDEIIN YVQSLQRQVE IS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48560.17e-45bHLH family protein