PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028098956.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YC
Protein Properties Length: 255aa    MW: 28599.3 Da    PI: 6.4179
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028098956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC178.27.9e-56741771101
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     ql+sfw++q   iek+tdfknh+lPlarikki+kadedv+misaeaP+++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl
  XP_028098956.1  74 QLQSFWANQyqeIEKVTDFKNHNLPLARIKKIMKADEDVRMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 168
                     89******99999********************************************************************************** PP

           NF-YC  93 vdivprdel 101
                     vdivpr++l
  XP_028098956.1 169 VDIVPREDL 177
                     ******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDQQGHGQPQ GAQLHYGTSQ FEPNQVGGTP NRGPVVTSVG PTQSPSQPGG AQLAQHQLAY  60
QHIHQQQQQL LQQQLQSFWA NQYQEIEKVT DFKNHNLPLA RIKKIMKADE DVRMISAEAP  120
IVFARACEMF ILELTLRSWN HTEENKRRTL QKNDIAAAIT RTDIFDFLVD IVPREDLKDE  180
ALASIPRGTM PVGGPADAYP YYYMPPQHSP QAGTPGMIMG KPVLDPVMYA QQPHPYMAPQ  240
MWPQAPQQPQ SPTDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147153RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.33e-76NF-YC family protein