PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028098981.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 176aa    MW: 19634.6 Da    PI: 10.3926
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028098981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.16.7e-1945129190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY++YAke GF++++++skk    ge    t  C+ +gk++ +++k    ++ +++++t+Ckak+  ++  dgkw + +++l+HnH ++
  XP_028098981.1  45 QFYQRYAKEKGFRMCIRSSKKV--GGEARYVTVACNHSGKPKIKSSK---PHQLHPQSKTNCKAKICANLLGDGKWILRSMVLDHNHGVS 129
                     6*****************9998..9999**************99877...89999********************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MAEVSSGSKF VGLNEGHNEI EIEKAKSVED PTVGMLFDSI DDLVQFYQRY AKEKGFRMCI  60
RSSKKVGGEA RYVTVACNHS GKPKIKSSKP HQLHPQSKTN CKAKICANLL GDGKWILRSM  120
VLDHNHGVSP GKARFYRCHR VLNSTVKRRL ELHAKAGIRM NKSFNSLVVQ AGGHEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.12e-15FAR1 family protein