PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099199.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 424aa MW: 49472.3 Da PI: 7.8119

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.1	2.6e-22	65	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+YAk +GFsvr+s+++ +n+ + +r++vCs+eg re++ + e+ r++raetr C+a+++v+ +k k++vt+++ eHnH+la XP_028099199.1 65 FYNAYAKVIGFSVRRSRKRIIGDNKFVESRKWVCSREGVREKKYLQrVERVRTPRAETRLFCNATFRVRYDKtARKYVVTHFVGEHNHPLA 155 ***************************************9988846777889*************999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFSVRRS RKRIIGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA 120 ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHSQGG YEKVGFIHRD 180 LHNQFQAERK VQLAEGDAEG ALGYLSAKLD ADPLFFFKYN IDKDNRLDKI FWADCRSRMD 240 YAAFGDKPFV ILAGMSNHFM TTIFGCALLP DETMETYTWV LEMLMEAMDG KRPISVVTDG 300 DRAMRQAIKR VIPNCRHRLC SWHLEKNAST NVHIPEFTTD FAQLMLKKCK IDEFDNAWAA 360 MVKQYKLENN NWVSDIHLKR DNWAEAYLRG HMFAGMRSTQ RVEGINAYFN IFLNQKVRLY 420 EFVA

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFSVRRS RKRIIGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA  120
ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHSQGG YEKVGFIHRD  180
LHNQFQAERK VQLAEGDAEG ALGYLSAKLD ADPLFFFKYN IDKDNRLDKI FWADCRSRMD  240
YAAFGDKPFV ILAGMSNHFM TTIFGCALLP DETMETYTWV LEMLMEAMDG KRPISVVTDG  300
DRAMRQAIKR VIPNCRHRLC SWHLEKNAST NVHIPEFTTD FAQLMLKKCK IDEFDNAWAA  360
MVKQYKLENN NWVSDIHLKR DNWAEAYLRG HMFAGMRSTQ RVEGINAYFN IFLNQKVRLY  420
EFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-65	FAR1 family protein