PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028099312.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 145aa    MW: 17056.6 Da    PI: 4.4406
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028099312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix55.71.3e-171483886
        trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                    m++ g++r++k+Ckekwen+nk++k++k+++kkr +e+s+tcpyf+ le
  XP_028099312.1  1 MKKIGYNRNAKRCKEKWENINKYFKRVKDSNKKR-PEDSKTCPYFEMLE 48
                    7889*****************************8.99********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MKKIGYNRNA KRCKEKWENI NKYFKRVKDS NKKRPEDSKT CPYFEMLEFI YERKSKKVDN  60
SDNSGCYSKP EDILMLMMGQ QQQQPPPQQQ QQQQQQRPES LTEDGESENT DQNQEDNGGD  120
DDDDDDNGDD YQIVANKPFS VTNIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.13e-25Trihelix family protein