PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099318.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 435aa MW: 50085.4 Da PI: 6.8353

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.8	2e-14	37	123	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YAk+ GF + ++++ ++ge + C++ r+++++ + +++ +++ +Ckak++ +++kdg++++t+++leH+H+l+p XP_028099318.1 37 FYAKYAKHFGFAIAYGTQNYD-NDGELKYFGIECTRARMRRKRSEV--NPLEPSLSSKNDCKAKVRGSLQKDGTFKLTTVVLEHTHDLVP 123 9*************99997.8999*********9999876..9999*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MEGSNNPSHE VEEPESGEVK EPKQGMCFTS KQEVYAFYAK YAKHFGFAIA YGTQNYDNDG 60 ELKYFGIECT RARMRRKRSE VNPLEPSLSS KNDCKAKVRG SLQKDGTFKL TTVVLEHTHD 120 LVPSDSRHFA MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH 180 IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYKAF 240 GDVVTFDTTY LTNKYDMPFA PFVGVNHHGQ SILFGCGLLC NENTETFVWL FRAWLSCMSD 300 TPPNAIITDQ CKAMQMPYKL SSHRLDIAVY ESFTKNEFDE EWQAMIAKFG LHDNDWLGGL 360 YDERHRWIPA YVKDMFWAGM STTQRSESMN AFFDGYVNSK TTLKQFVEQY DNALRSKVEK 420 RPKQILNLET NCMIA

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MEGSNNPSHE VEEPESGEVK EPKQGMCFTS KQEVYAFYAK YAKHFGFAIA YGTQNYDNDG  60
ELKYFGIECT RARMRRKRSE VNPLEPSLSS KNDCKAKVRG SLQKDGTFKL TTVVLEHTHD  120
LVPSDSRHFA MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH  180
IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYKAF  240
GDVVTFDTTY LTNKYDMPFA PFVGVNHHGQ SILFGCGLLC NENTETFVWL FRAWLSCMSD  300
TPPNAIITDQ CKAMQMPYKL SSHRLDIAVY ESFTKNEFDE EWQAMIAKFG LHDNDWLGGL  360
YDERHRWIPA YVKDMFWAGM STTQRSESMN AFFDGYVNSK TTLKQFVEQY DNALRSKVEK  420
RPKQILNLET NCMIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	6e-83	FAR1 family protein