PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099319.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 489aa MW: 56998.9 Da PI: 8.7988

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.7	1.6e-12	12	98	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YAk+ GF + ++++ ++ge + C++ r+++++ + +++ +++ +Ckak++ +++kdg++++t+++leH+ +l+p XP_028099319.1 12 FYAKYAKHFGFAIAYGTQNYD-NDGELKYFGIECTRARMRRKRSEV--NPLEPSLSSKNDCKAKVRGSLQKDGTFKLTTVVLEHTYDLVP 98 9*************99997.8999*********9999876..9999*******************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MCFTSKQEVY AFYAKYAKHF GFAIAYGTQN YDNDGELKYF GIECTRARMR RKRSEVNPLE 60 PSLSSKNDCK AKVRGSLQKD GTFKLTTVVL EHTYDLVPSD SRHFAMNKRI LTPVKRRLEI 120 NDEAGIGVAR NFHSMVVEAG GFEALTFDER DARNHIDKAR RLRLGVGDAE SVAFYFHRMQ 180 QQNSNFYSEM DFDGEGRLRN LFWADARSRA AYKAFGDIVT FDTTYLTNKY DMPFAPFVGV 240 NHHGQLILFG CGLLCNENTE TFVWLFRAWL SCMSDTPPNA IITDQCKAMQ NAIQIVFPQA 300 RHRWCLWHIL KKIPEKLRAC SQYESIKFAL QKAVYESFTK NEFDEEWQAM IAKFGLHDND 360 WLGGLYDERH RWIPAYVKDM FWAGMSTTQR NESMNAFFDG YVNSKTTLKQ LVEQYDNALR 420 SKVEKEAKAD FKSRNKLYDC LTMYAFEKQF RAAYTNTKFK EVQVEMKRLF YCRATLVEEK 480 GSICTYHVK

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MCFTSKQEVY AFYAKYAKHF GFAIAYGTQN YDNDGELKYF GIECTRARMR RKRSEVNPLE  60
PSLSSKNDCK AKVRGSLQKD GTFKLTTVVL EHTYDLVPSD SRHFAMNKRI LTPVKRRLEI  120
NDEAGIGVAR NFHSMVVEAG GFEALTFDER DARNHIDKAR RLRLGVGDAE SVAFYFHRMQ  180
QQNSNFYSEM DFDGEGRLRN LFWADARSRA AYKAFGDIVT FDTTYLTNKY DMPFAPFVGV  240
NHHGQLILFG CGLLCNENTE TFVWLFRAWL SCMSDTPPNA IITDQCKAMQ NAIQIVFPQA  300
RHRWCLWHIL KKIPEKLRAC SQYESIKFAL QKAVYESFTK NEFDEEWQAM IAKFGLHDND  360
WLGGLYDERH RWIPAYVKDM FWAGMSTTQR NESMNAFFDG YVNSKTTLKQ LVEQYDNALR  420
SKVEKEAKAD FKSRNKLYDC LTMYAFEKQF RAAYTNTKFK EVQVEMKRLF YCRATLVEEK  480
GSICTYHVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-106	FAR1 family protein