PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099372.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 339aa MW: 38617.9 Da PI: 6.3479

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.1	5.5e-07	188	225	5	47
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekA 47 h ++Er RR+r +++++ Lr+llP+ +s K+s i + A XP_028099372.1 188 HMINERLRRERQKHSYSGLRSLLPPgT---KSDKNS---IIQVA 225 889*********************944...555555...55555 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MEEFFQYGSR SPIYWIEDDA LPANQSGFVR CTDKEEVLPV NQSGLVGYTS QEEALPVNQS 60 ALLGYANQEE ALPVNQSGFV RYANQEEAFV IHTNQKEALP VKPSAFVRYP NQEEALLGNQ 120 SAFALPVKQS AFVRYKEPPI LEGGVGSESW VVKLNNQSVN KRMIEFLRKN WSPMMESKDS 180 DRERSYRHMI NERLRRERQK HSYSGLRSLL PPGTKSDKNS IIQVAVKEVQ VLEKNKAELE 240 RRNREIEAIL GAREDRKIEG AKIRLRVADP SSGIDSMLEV LKCLKNMGSK ITAIQSIFSD 300 KELSAVLEIE TQIESEEVEK AVQRKLFEVE MKLRTQVPI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	198	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	6e-39	bHLH family protein