PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028099498.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 147aa    MW: 16720.9 Da    PI: 10.024
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028099498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.68.4e-1590137353
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                     y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k+
  XP_028099498.1  90 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKI 137
                     9***************988532...5**********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MVGHHDSYNC FPSNWKKSER LKTGGYDMKA KAARAYDLAA LKYWGPSTHI NFPLENCQQE  60
LEHMKNMTRQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF  120
STQEEAAEAY DVAAIKISRG IVCIPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.13e-59AP2 family protein