PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099655.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 1750aa MW: 196078 Da PI: 4.9609

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.2	1.6e-19	25	80	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t++qle+Le+ ++++ yps+++r+eL+ klgL++rq ++WF+ rR k+kk XP_028099655.1 25 PKRQMKTPYQLEILEKTYASETYPSEATRAELSVKLGLSDRQLQMWFCHRRLKDKK 80 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1750 aa Download sequence
MEAASEGENN KNNSDSSPIE GPKKPKRQMK TPYQLEILEK TYASETYPSE ATRAELSVKL 60 GLSDRQLQMW FCHRRLKDKK DGGVKKPPAS GAVVAKRGLL DSDRDELMVA ERGSDHGSRS 120 GSGSESGSGS SQFDYGGGVP MVGRYYESPR SVMERRVVAC VEAQLGEPLR EDGPILGVDF 180 DELPPGAFGV PIVMTKQRDQ SGVSYGGKSF EQCDLKSIKA AVRGHRECLL DEPSIGFDSY 240 GRLIPSNFYD SPVECPRANP SVLVHGNGQL SRGYGVQGQV QSVSLSSQQG RQGHFSSPSG 300 DNNCIAQRES LINMQLDASD SAHPAIVPEN TDASDRHISN SEYGLQMEKK RKSDESRIGR 360 QVDANEKRIR KELEKQDILR RKREEQMKRE MEKQDRERRK EEERLMREKQ RLQERFEREE 420 RREIERREKF LQKESLRAER KRQKEELRRE KEEVRLKASL ERATARRMAK ESMELIEDER 480 LELMELAASS KGLPSIISLD HDTLQNLESF RDLLCSFPLK SVQLKRPFAI RPWTDSEENI 540 GNLLMVWRFC ITFADVLGLW PFTLDEFVQA FHDYDSRLLS EIHISLLKLI IKDIEDVART 600 PSTGLGTNQC SSANPEGGHP QIVEGAYLWG FDICTWKNHL NPLTWPEILR QFALSAGFGP 660 QLKKKGIDRA CLHDKDETKG CEDIISVLRN GSAAENAVAI MQEKGFPLQR RSRHRLTPGT 720 VKFAAYHVLS LEGNKGLTVL ELAHKIQKSG LRNLTTSKTP EASISVALSR DAVLFERTAP 780 STYCVRPAFR KDPADAEALL AAAREKIKRF ENGFLSGENA DDVERDEDSE GEGADGPEVH 840 DLGSPNANKN SSNEDSTNSG NEKDNFLDDV TLNMQNEPGT AGTSVNQFID DSGKDNVAII 900 PYQGDTEIDE SKSGEPWVQG LTEGEYSDLS VXERLNALVA LVGKANEGNS IRAVLEDRLD 960 AANVLKKQMW AEAQLDKKRI KEESIPKFLY SSFTGNETEI KQACAATESS QSPLAGFDDK 1020 ISESPPNTVK KESFVGADNV QDHLNSLPPD RILVGPDNSI CQISSSVQQN GYAAERSRLQ 1080 LKTYIGHRAE EMYIYRSLPL GQDRRRNRYW RFVASASRHD PGSGRIFVES PDGYWRLIDS 1140 EEAFDALLAS LDTRGIRESH LHIMLRNIEK SFKENVRKNS QSASIMGRSV NVGNEAAEMD 1200 SSPAQSGGAD SPSSTVSGSN SITSEPSSSF RIELGKNETE KKAAMERYQE FQMWMWKECF 1260 NSSTLFAMRY GEKRCRPLLG ICDFCLDSYI VENDHCPSCY RSFGTFDNKI NLSEHVPLCE 1320 EERKESRKNS NISKFCHPLR IRLLRALLTV IEVSVPSEAL QSSWMENCRK TWGIKLHASL 1380 SAVDLLQILT EFEAVIKRCC LSTLFETTDE LLAVSALSGR GVCDSADAGS VPQLPWIPQT 1440 TAAVALRLLE LDGSISYTGD QKAELLDNNE VEDFTKLPSR YAFMKNIEEV GQPEVHQGKH 1500 RKERNSADVA NLYGISGYRQ GVRGRGRVPG RSQKRVTGSG KRNLRNVVTL TDVLRQQGQR 1560 TDGQKLGRGR RTIRRRREEK REVQDQETPP SHFGNIGGLR NFVESPRNSG GEWVGEEIEQ 1620 MQIDGADNSN SLEAIESDDN DECAVGYENG KWRTGNLMVM SDEDVDGSGD DNDFEEMGRE 1680 AFEENMVMNE DFEEMGREAF EENVDMNEYS EDMGREGFEA NVDLNGDSDG NGDQNEDEST 1740 DSADSEDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1750 aa Download sequence

MEAASEGENN KNNSDSSPIE GPKKPKRQMK TPYQLEILEK TYASETYPSE ATRAELSVKL  60
GLSDRQLQMW FCHRRLKDKK DGGVKKPPAS GAVVAKRGLL DSDRDELMVA ERGSDHGSRS  120
GSGSESGSGS SQFDYGGGVP MVGRYYESPR SVMERRVVAC VEAQLGEPLR EDGPILGVDF  180
DELPPGAFGV PIVMTKQRDQ SGVSYGGKSF EQCDLKSIKA AVRGHRECLL DEPSIGFDSY  240
GRLIPSNFYD SPVECPRANP SVLVHGNGQL SRGYGVQGQV QSVSLSSQQG RQGHFSSPSG  300
DNNCIAQRES LINMQLDASD SAHPAIVPEN TDASDRHISN SEYGLQMEKK RKSDESRIGR  360
QVDANEKRIR KELEKQDILR RKREEQMKRE MEKQDRERRK EEERLMREKQ RLQERFEREE  420
RREIERREKF LQKESLRAER KRQKEELRRE KEEVRLKASL ERATARRMAK ESMELIEDER  480
LELMELAASS KGLPSIISLD HDTLQNLESF RDLLCSFPLK SVQLKRPFAI RPWTDSEENI  540
GNLLMVWRFC ITFADVLGLW PFTLDEFVQA FHDYDSRLLS EIHISLLKLI IKDIEDVART  600
PSTGLGTNQC SSANPEGGHP QIVEGAYLWG FDICTWKNHL NPLTWPEILR QFALSAGFGP  660
QLKKKGIDRA CLHDKDETKG CEDIISVLRN GSAAENAVAI MQEKGFPLQR RSRHRLTPGT  720
VKFAAYHVLS LEGNKGLTVL ELAHKIQKSG LRNLTTSKTP EASISVALSR DAVLFERTAP  780
STYCVRPAFR KDPADAEALL AAAREKIKRF ENGFLSGENA DDVERDEDSE GEGADGPEVH  840
DLGSPNANKN SSNEDSTNSG NEKDNFLDDV TLNMQNEPGT AGTSVNQFID DSGKDNVAII  900
PYQGDTEIDE SKSGEPWVQG LTEGEYSDLS VXERLNALVA LVGKANEGNS IRAVLEDRLD  960
AANVLKKQMW AEAQLDKKRI KEESIPKFLY SSFTGNETEI KQACAATESS QSPLAGFDDK  1020
ISESPPNTVK KESFVGADNV QDHLNSLPPD RILVGPDNSI CQISSSVQQN GYAAERSRLQ  1080
LKTYIGHRAE EMYIYRSLPL GQDRRRNRYW RFVASASRHD PGSGRIFVES PDGYWRLIDS  1140
EEAFDALLAS LDTRGIRESH LHIMLRNIEK SFKENVRKNS QSASIMGRSV NVGNEAAEMD  1200
SSPAQSGGAD SPSSTVSGSN SITSEPSSSF RIELGKNETE KKAAMERYQE FQMWMWKECF  1260
NSSTLFAMRY GEKRCRPLLG ICDFCLDSYI VENDHCPSCY RSFGTFDNKI NLSEHVPLCE  1320
EERKESRKNS NISKFCHPLR IRLLRALLTV IEVSVPSEAL QSSWMENCRK TWGIKLHASL  1380
SAVDLLQILT EFEAVIKRCC LSTLFETTDE LLAVSALSGR GVCDSADAGS VPQLPWIPQT  1440
TAAVALRLLE LDGSISYTGD QKAELLDNNE VEDFTKLPSR YAFMKNIEEV GQPEVHQGKH  1500
RKERNSADVA NLYGISGYRQ GVRGRGRVPG RSQKRVTGSG KRNLRNVVTL TDVLRQQGQR  1560
TDGQKLGRGR RTIRRRREEK REVQDQETPP SHFGNIGGLR NFVESPRNSG GEWVGEEIEQ  1620
MQIDGADNSN SLEAIESDDN DECAVGYENG KWRTGNLMVM SDEDVDGSGD DNDFEEMGRE  1680
AFEENMVMNE DFEEMGREAF EENVDMNEYS EDMGREGFEA NVDLNGDSDG NGDQNEDEST  1740
DSADSEDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	81	RRLKDKKD
2	349	375	KKRKSDESRIGRQVDANEKRIRKELEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein