PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028099659.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 291aa    MW: 33049.4 Da    PI: 6.8596
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028099659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.41.3e-0948115272
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                      Y +YAk+vGFs+  ++++   ++g+ ++    Cs+ g+r+ +++   +  +++ +++++Cka+ +++ ++
  XP_028099659.1  48 LYATYAKHVGFSIAHRAQHFG-DDGKLKNFAIECSRTGERKMKSEV--NPLKPSLSSKISCKARRRLEIND 115
                     69************9988776.8999***************98866..9999***********98887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MEVDSNGGDN PLVNEGKQVE SDFRSPQKQV EEPKTGMCFS LREEVYTLYA TYAKHVGFSI  60
AHRAQHFGDD GKLKNFAIEC SRTGERKMKS EVNPLKPSLS SKISCKARRR LEINDQAGIG  120
VSRNYHSMVV EVGGYVSLTF DERDARNYIN RARRLRLGEG DAESLQSYFM RMQAHSEKFF  180
YVIDVDKEFC IRNLFGADAR SRAMYESFGD VVSFDTTYLT NKYDMPFALF VGVNHHGQLI  240
LLGCGLLSSD DTDTFVWLFK SWLSCMSNNP PKAIITDQCR AMQNAIEIVF P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.16e-49FAR1 family protein