PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028099912.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HD-ZIP
Protein Properties Length: 200aa    MW: 22667.8 Da    PI: 6.0792
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028099912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-18122174254
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     rk+ +++k+q  +Lee+F+ +++++ +++  LAk+lgL  rqV vWFqNrRa+
  XP_028099912.1 122 RKKLRLSKDQSMILEECFKVHNTLNLKQKLALAKRLGLRPRQVEVWFQNRRAR 174
                     788899**********************************************8 PP
2HD-ZIP_I/II78.69.9e-26122176155
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtk 55 
                     +kk+rlsk+q+ +LEe+F+ +++L+ ++K +la++Lgl+prqv+vWFqnrRAR  
  XP_028099912.1 122 RKKLRLSKDQSMILEECFKVHNTLNLKQKLALAKRLGLRPRQVEVWFQNRRARLE 176
                     69***************************************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MASEEVRKPP SIPPYPEMLI PLLQIPPKIS QKKNFPSFDR NSETCRVETR SLLKGIDVNQ  60
VPSTIDCEEE AGVSSPNSTI SSISGKRSER EEPNGEDLDL DLDLERASSR GISDEEDGDT  120
SRKKLRLSKD QSMILEECFK VHNTLNLKQK LALAKRLGLR PRQVEVWFQN RRARLELCLF  180
FNGVFGILSR VKVQELQSGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121127SRKKLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.17e-44HD-ZIP family protein