PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100080.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 185aa    MW: 21061.8 Da    PI: 6.5091
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR158.52.2e-1845126187
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                     +fY++YAke GF +++++skk     e+   t  C+ +gk++ +++k    ++ +++++t+Ckak++ ++  dgkw + +++l+HnH
  XP_028100080.1  45 QFYQRYAKEKGFGMCIRSSKKV--GAEVRYVTVACNHSGKPKIKSSK---LHQLHPQSKTDCKAKIRANLLGDGKWILRSMVLDHNH 126
                     6*****************9998..8999**************99877...889999******************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEEVSSGSES VGLNEGHNEI EIEKAESVED PKVGMLFDSI DDLFQFYQRY AKEKGFGMCI  60
RSSKKVGAEV RYVTVACNHS GKPKIKSSKL HQLHPQSKTD CKAKIRANLL GDGKWILRSM  120
VLDHNHGAGG HEKLTYLEKD CRNNMDRVRR IELGEGDAIA MHNYFLKMQA HNSEFFHMMD  180
LDEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.15e-18FAR1 family protein