PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100210.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 157aa    MW: 17263.4 Da    PI: 6.5188
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB176.33e-5518115198
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vr+qdr+lPian+srimkk+lP+n+ki+kdak+tvqecvsefisf+t+easdkcq+ekrktingddll a+atlGfedy+++lkvyl++yreleg
  XP_028100210.1  18 VRNQDRYLPIANISRIMKKALPSNGKIAKDAKDTVQECVSEFISFITNEASDKCQKEKRKTINGDDLLCAMATLGFEDYIASLKVYLTRYRELEG 112
                     589******************************************************************************************** PP

           NF-YB  96 ekk 98 
                     ++k
  XP_028100210.1 113 DTK 115
                     975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MADAPASPAG VQSPHSDVRN QDRYLPIANI SRIMKKALPS NGKIAKDAKD TVQECVSEFI  60
SFITNEASDK CQKEKRKTIN GDDLLCAMAT LGFEDYIASL KVYLTRYREL EGDTKGSARG  120
GDRSSERDIV GAQIDPNALF AHQQSFTQGM NYLNSQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.12e-71NF-YB family protein