PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028100211.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 155aa MW: 17021.1 Da PI: 7.3425

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028100211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	170.6	1.8e-53	18	112	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vr+qdr+lPian+srimkk+lP+n+ki+kdak+tvqecvsefisf+t+easdkcq+ekrktingddll a+atlGfedy+++lkvyl++yre ++ XP_028100211.1 18 VRNQDRYLPIANISRIMKKALPSNGKIAKDAKDTVQECVSEFISFITNEASDKCQKEKRKTINGDDLLCAMATLGFEDYIASLKVYLTRYREGDT 112 589****************************************************************************************9665 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MADAPASPAG VQSPHSDVRN QDRYLPIANI SRIMKKALPS NGKIAKDAKD TVQECVSEFI 60 SFITNEASDK CQKEKRKTIN GDDLLCAMAT LGFEDYIASL KVYLTRYREG DTKGSARGGD 120 RSSERDIVGA QIDPNALFAH QQSFTQGMNY LNSQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.7	2e-68	NF-YB family protein