PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100215.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 110aa    MW: 12212.9 Da    PI: 8.0341
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB171.59.5e-5418110193
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                     vr+qdr+lPian+srimkk+lP+n+ki+kdak+tvqecvsefisf+t+easdkcq+ekrktingddll a+atlGfedy+++lkvyl++yre+
  XP_028100215.1  18 VRNQDRYLPIANISRIMKKALPSNGKIAKDAKDTVQECVSEFISFITNEASDKCQKEKRKTINGDDLLCAMATLGFEDYIASLKVYLTRYREV 110
                     589****************************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MADAPASPAG VQSPHSDVRN QDRYLPIANI SRIMKKALPS NGKIAKDAKD TVQECVSEFI  60
SFITNEASDK CQKEKRKTIN GDDLLCAMAT LGFEDYIASL KVYLTRYREV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38880.82e-63NF-YB family protein