PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100234.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 293aa    MW: 34499 Da    PI: 6.1891
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100234.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.95.1e-1137110278
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 
                      Y +YAk+vGFs+  ++++   ++g+ ++    Cs+ g+r+++++   +  +++ +t++gCka+ +++ +++++  v
  XP_028100234.1  37 LYATYAKHVGFSIAHRAQHFG-DDGQLKNFAIECSRAGERKKKSEV--NPLKPSLSTKIGCKARRRLEINDQARIGV 110
                     69************9988776.8999**************998766..999************99998887766555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEVDSNDGDN PSVNEVEQVE EPKKGMCFSS REEMYTLYAT YAKHVGFSIA HRAQHFGDDG  60
QLKNFAIECS RAGERKKKSE VNPLKPSLST KIGCKARRRL EINDQARIGV SRNYHSMVIE  120
AGGYEPLTFD ERDARIYINR ARRLRLGEGD AESLQSYFMR MQTHSEKFFY VIDVNEEFRI  180
RNLFWADARS RAMYESFGDV VSFDTTYLTN KYDMPFAPFK ISEKLKGYAQ YEPIKLAMQN  240
TVYDCLTRDE FEEKWEEMLT KFNLYDNEWL GVLCHERHRW IPVYVKDIFW VGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32250.23e-26FAR1 family protein