PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100239.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 229aa    MW: 26226.7 Da    PI: 10.6865
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2353.6e-11109150351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ gt  eAa+++++a+ 
  XP_028100239.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQVEAARLYDRAAF 150
                     79**98..47*********4.....5**********99********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVSIRRRKLL GLCSGQRSFL SPLARFFDNG HVFESFIHNT KPVSVHPMPS VDAEQTKEKI  60
ISKVSPGASN ASGSSMSKEK HNQQHPVPEV KHRKRHRRKH FENQEPCLMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTVGTQVE AARLYDRAAF MCGREPNFEL SEEEKQDLRQ FKWDEFLALT  180
RSAINNKKHR RRSGAGSRRK SKPSAQNSDW ELNQGVNGFS ASEDVEPDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.25e-44ERF family protein