PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100278.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 155aa    MW: 17806.4 Da    PI: 8.4953
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3375.9e-1242125596
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     lt+ +v  ++rl +p +  +   ++    +  ++ + +g+ We+ +  +  s+r  + + W +Fvk+n+L+ gD +vF+++  ++ + +v++
  XP_028100278.1  42 LTKTHVRPLCRLFVPTNMHRVLPSI---AVP-VILTYRGNNWEMIYFGDHISKR--FDTRWARFVKDNNLRIGDACVFEVT--ECSNTLVRF 125
                     6667777777788777765444333...223.445679********66777777..7888*******************64..333335544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MGYQKKNRRE APAAAAAAKN ELGEEEEEFW ALSDKPNFSM LLTKTHVRPL CRLFVPTNMH  60
RVLPSIAVPV ILTYRGNNWE MIYFGDHISK RFDTRWARFV KDNNLRIGDA CVFEVTECSN  120
TLVRFRVQIL RGDFPPELLA RVHNGQTSDA AIVIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-10B3 family protein