PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028100467.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 235aa MW: 26168.2 Da PI: 5.1749

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028100467.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.9	9.6e-05	187	223	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+++++ +Lr ++P a ++ +++L +Av+Y+ksL XP_028100467.1 187 REKMRKMVKTLRGIVPGA-----NQMNTVAVLDEAVRYLKSL 223 79999**********8.....58*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MQSDQQLFPQ NPVFPLSNQA GGNYMYNAPN ASAFGGTVLP TGVRNSRPFH GVDFQPSDVC 60 PKNFIIFDQT EKRSQIMFNP AIAPKFCYPG LNMYTSHIHD TVEREAITEK EHSSSMGEDS 120 DDIDALLSLE EEEEEYYNEE EISTARTCGN YESDSSDSCS SYGSKPKKSR LPSLQKSAGS 180 CNSERKREKM RKMVKTLRGI VPGANQMNTV AVLDEAVRYL KSLKVEVQKI GVGNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29950.1	2e-33	bHLH family protein