PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028100469.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 243aa MW: 28316.6 Da PI: 9.0231

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028100469.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	36	1.4e-11	139	163	1	25
---SS-EEEEEEE--TT-SS-EEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYY 25 ldDgy+WrKYGqK+vk+s +pr + XP_028100469.1 139 LDDGYKWRKYGQKVVKNSLHPRRFL 163 59********************875 PP
2	WRKY	60	4.3e-19	187	227	19	59
SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 f rsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ XP_028100469.1 187 FFLRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 227 577*************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEGERGGIPN YELQVSFAPP HVIQEMGFVQ FEDHNQVMSF LAPSQPLNGG GTTTTTTNNN 60 DTEAGMGFGH NGLSSRPSWN SNQQEAQLDP KNVNDENAKD GSNSWWRSSS TEKNKVKMRR 120 KLREPRFCFQ TRSEVVDVLD DGYKWRKYGQ KVVKNSLHPR RFLMHTFHRR RVIEFFFSVN 180 KLLLDRFFLR SYYRCTHSNC RVKKRVERLS EDCRMVITTY EGRHNHSPCD DSNSSEPECF 240 TSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	7e-61	WRKY family protein