PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028100773.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MIKC_MADS

Protein Properties

Length: 144aa MW: 16578 Da PI: 10.5479

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028100773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.9	1.3e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCda+v vi++ss+g+lye++s XP_028100773.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAKVGVIVISSSGRLYEFAS 59 8***********************************************86 PP
2	K-box	64.3	4.3e-22	76	142	8	71
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 + +++a+ +q+e++ L+++++ Lq+++R+l Ge+L++Ls+++Lq+Le qLe+slk iR+kK + XP_028100773.1 76 HqllSPNSEAKLWQREAKSLRQQLNYLQESHRKLTGEELSDLSMEDLQNLEGQLETSLKGIRTKKVQ 142 335567788999*****************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AKVGVIVISS SGRLYEFASP 60 SMRSIFERYN NEQENHQLLS PNSEAKLWQR EAKSLRQQLN YLQESHRKLT GEELSDLSME 120 DLQNLEGQLE TSLKGIRTKK VQKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	7e-64	MIKC_MADS family protein