PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028100893.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 283aa MW: 31859.8 Da PI: 7.9074

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028100893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.1	7.3e-24	99	188	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs+rks+ +k+k+++eit+r fvC+keg+r +k++ + +r+e r+gC a+l +k+++ gk++ ++++++HnH+l+ XP_028100893.1 99 DFYNNYGGKVGFSIRKSYAHKNKQTKEITSRIFVCYKEGTRGIDKRD-PLVKFSRQEVRCGCGARLSIKLDRnLGKYVAIDFVEHHNHDLV 188 6*****************************************999.88899**************989*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MVEGHDGEGR RMAEGGDYYC EGRRMAEGGD CHGNGRSMAE GGDCHGEGRS MAEGRDATAR 60 QDCGPEKVME ENNVVDELGS CGWKPKLGML FDFEQAAYDF YNNYGGKVGF SIRKSYAHKN 120 KQTKEITSRI FVCYKEGTRG IDKRDPLVKF SRQEVRCGCG ARLSIKLDRN LGKYVAIDFV 180 EHHNHDLVRQ ECVHMLLSQR KISTTQAIEV ELASESGIPL RSAYELFGRE CGGRASLGFT 240 KLDQKNYLRS KRQKDLEYGE AGSVLQYFRK KTVENPSFIM QSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-32	FAR1 family protein