PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028100916.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 160aa MW: 18657.4 Da PI: 9.8687

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028100916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	78.8	7.4e-25	1	55	43	97
NF-YB 43 isfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +sfvt+eas+kc++ekrkt+ngdd++wal++lGf+dy+++++ yl++y e+e+++ XP_028100916.1 1 MSFVTGEASEKCHKEKRKTVNGDDICWALGSLGFDDYAKSMRRYLNRYSEIEQKR 55 59*************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MSFVTGEASE KCHKEKRKTV NGDDICWALG SLGFDDYAKS MRRYLNRYSE IEQKREHQNK 60 NNDGRDEFER MLMINGIIHR KLWSSSMAPN RRISTTSSIN SFFQFIHVVD LKSLLMDIKG 120 PAYAYGRRNI PKFEASIVTT VNLLFEFLNH SKLLVIMSHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	6e-26	NF-YB family protein