PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028101003.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 134aa    MW: 15141.1 Da    PI: 6.6712
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028101003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26034.84.6e-111425899
          DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
                    m+s++++A++ra+dPv G++++i++l+qq+++ +ael+++ +
  XP_028101003.1  1 MKSMIFHANVRANDPVGGCHRIIRELEQQIQHYEAELEVVLR 42
                    89***********************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MKSMIFHANV RANDPVGGCH RIIRELEQQI QHYEAELEVV LRQLVVCRVE NVVNEMQNPN  60
SVVGSSDYYG HQPIQDPLGF DDMQRSGAIK VDMQASSSSS MVMNNGKQIL LRNRNISSHN  120
SPFYSSPMNQ LSYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.16e-11LBD family protein