PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101079.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 1220aa MW: 138045 Da PI: 5.1685

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.7	3.6e-10	300	342	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_028101079.1 300 EWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 342 6***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1220 aa Download sequence
MDHQNTTIGD NQENNTDANK TILVTKQVRL VRFRDIVETT IFAALYALPN QHAGYEKLIL 60 KVRDILHRNM WSSHFFSFIL FTFGFSSGFL AAMIPLWKMV MEWSFYFRAF MLVTTTGFYI 120 QLKNNGMQPM DHQNTTIGDN QENNTDANKT ILVTKQVRLV GFRDIVATTI FAALYALPNQ 180 HAGYEKLILK VRDILHRNMW PSHFFSFILF TFGFSSGFLA AMIPLWKMVM EWSFYFRAFM 240 LVTTFGFYVI FCVILNEKLP NFTLGNILDF LVVWLLGCSL VFLEVATYAI ISKASGQITE 300 WTREEDEKLL HLAKLMPTQW RTIAPIVGRT PSQCLERYEK LLDAACAKDE NYEAGDDPXP 360 GEIDPNPELK PARPDPVDMD EDEKEMLSEA RARLANTRGK KAKRKAREKQ LEEARRLASL 420 QKRRELKAAG IQTRQRKRKR MGIDYNAEIP FEKKPPPGFF DVADEDQPVE QLKFPTTIEE 480 LEGEKRTDRE ARLRKQDIAR NKIAQRQDAP SAILQANKLN DPEAVRKRSK LMLPAPQISD 540 NELEEIGKMG YTSDLLAGSE ELIEGNGATR ALLANYAQTP RQGMTPLRAP QRTPAGKGDA 600 IMMEAENLAR LRESQTPLLG GENPELHPSD FSGVTPKKRE IQTPNPMLTP SVTPGDGGMT 660 PRLGMIPSRD SFGLTPKGTP IRDELHINDG VDMHESAKLE LRRQADLRRN LRSGLSNLPQ 720 PKNEYQIVIQ PVPEDNEEPE EHIEEDMSDR MAREKAEEEA RQQLLLKKRS KVLQRELPRP 780 PAASLELIKN SLTRADEDKS SFVPPTLIEQ ADEMIRKELL SLLDHDNAKY PLDEKVDKDN 840 KKGAKRAANR RSVSVPVIED FEENELKEAG YFIKEEVQFL RLAMGHENES LDEFVEAHKT 900 CLNDIMYFPT RNGYGLSSVA GNMEKLAALQ NEFENVKKKM DDDTKKAQRL EQKIKLLTNG 960 CQMRAGKLWS QTEATFKQMD TAGTELECFQ ALQKQEQLAA SHRINGLWEE VQKQELEQTL 1020 QKRYGVLVAE KERIQSLVDA FRVQEEVAAK NRALELANAA ANETAEPPAD EIPSQEIDAA 1080 QVQANANQNS AVKLNINSDL TDGDEIIMCG DTVNGTIGEN LTSPEVAGGD LSAKDQQNTG 1140 ENGIKDNILT RPEDIVPETA EDGNADKDRQ VSIEVDGLSE TSVKEAVIVK NSLQEDSLVV 1200 PLLKTVYGFV TEFYVLRRLH

Sequence ? help Back to Top

Protein Sequence Length: 1220 aa Download sequence

MDHQNTTIGD NQENNTDANK TILVTKQVRL VRFRDIVETT IFAALYALPN QHAGYEKLIL  60
KVRDILHRNM WSSHFFSFIL FTFGFSSGFL AAMIPLWKMV MEWSFYFRAF MLVTTTGFYI  120
QLKNNGMQPM DHQNTTIGDN QENNTDANKT ILVTKQVRLV GFRDIVATTI FAALYALPNQ  180
HAGYEKLILK VRDILHRNMW PSHFFSFILF TFGFSSGFLA AMIPLWKMVM EWSFYFRAFM  240
LVTTFGFYVI FCVILNEKLP NFTLGNILDF LVVWLLGCSL VFLEVATYAI ISKASGQITE  300
WTREEDEKLL HLAKLMPTQW RTIAPIVGRT PSQCLERYEK LLDAACAKDE NYEAGDDPXP  360
GEIDPNPELK PARPDPVDMD EDEKEMLSEA RARLANTRGK KAKRKAREKQ LEEARRLASL  420
QKRRELKAAG IQTRQRKRKR MGIDYNAEIP FEKKPPPGFF DVADEDQPVE QLKFPTTIEE  480
LEGEKRTDRE ARLRKQDIAR NKIAQRQDAP SAILQANKLN DPEAVRKRSK LMLPAPQISD  540
NELEEIGKMG YTSDLLAGSE ELIEGNGATR ALLANYAQTP RQGMTPLRAP QRTPAGKGDA  600
IMMEAENLAR LRESQTPLLG GENPELHPSD FSGVTPKKRE IQTPNPMLTP SVTPGDGGMT  660
PRLGMIPSRD SFGLTPKGTP IRDELHINDG VDMHESAKLE LRRQADLRRN LRSGLSNLPQ  720
PKNEYQIVIQ PVPEDNEEPE EHIEEDMSDR MAREKAEEEA RQQLLLKKRS KVLQRELPRP  780
PAASLELIKN SLTRADEDKS SFVPPTLIEQ ADEMIRKELL SLLDHDNAKY PLDEKVDKDN  840
KKGAKRAANR RSVSVPVIED FEENELKEAG YFIKEEVQFL RLAMGHENES LDEFVEAHKT  900
CLNDIMYFPT RNGYGLSSVA GNMEKLAALQ NEFENVKKKM DDDTKKAQRL EQKIKLLTNG  960
CQMRAGKLWS QTEATFKQMD TAGTELECFQ ALQKQEQLAA SHRINGLWEE VQKQELEQTL  1020
QKRYGVLVAE KERIQSLVDA FRVQEEVAAK NRALELANAA ANETAEPPAD EIPSQEIDAA  1080
QVQANANQNS AVKLNINSDL TDGDEIIMCG DTVNGTIGEN LTSPEVAGGD LSAKDQQNTG  1140
ENGIKDNILT RPEDIVPETA EDGNADKDRQ VSIEVDGLSE TSVKEAVIVK NSLQEDSLVV  1200
PLLKTVYGFV TEFYVLRRLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	422	440	KRRELKAAGIQTRQRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein