PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101095.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 225aa MW: 25424.7 Da PI: 6.0571

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.3	4.2e-11	71	118	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rEr RR+r+N++f eL ++l + + +K +K +iL A++ +++L XP_028101095.1 71 TKACRERLRRERLNDRFVELSSILEPG---RPPKTDKLAILGDAIRVLNQL 118 6789********************8...89**************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MNSFDDNSWD LLDYGSFIDD VTSTDLYWGS QSAGVKADVS LPGATPQDEE CTEKECHRKR 60 TRNASCSKPG TKACRERLRR ERLNDRFVEL SSILEPGRPP KTDKLAILGD AIRVLNQLRA 120 ESQEFKETNE KLLEEIKSLK AEKNELRDEK LVLKGDKERM EQQLKAMPVS PAAFMPPHHH 180 PAAAYHAGTN KIPVFPSYGF VPMWQYLPPS AIDTTKDEEL RPPAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	82	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14410.2	3e-65	bHLH family protein