PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101126.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 448aa MW: 48875.6 Da PI: 6.4024

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	382	427	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +Av+YIk+Lq XP_028101126.1 382 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 427 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MDSDFGFRGE ECSDDSQQVQ QQQPIRNSGL VRYRSAPSSY FARLVNTGGG GGGENCDQFV 60 NPRPSSPETD QIFAGFMSCG GTQDSTPHNL CDIGQNSSAN EAFQPQFVAN LKEETDIFHH 120 HHHDEQQHNS GYSSASVSAS ASASQIIYQN QSQDTQPNHN SVASNSGMDN SCGVANSMRT 180 KLSGGAGSSN SNLIRHSSSP AGLFSHINNE NGYDVMRGMG NFGGGNGTNA EAWLPSPSRL 240 KRQMAFSSGP PSCSGPMAPI SENGSKCMEI SGPEHESFCE DHRNDRGYIA GFPIGSWDDS 300 AILSNSFLKR LEDDDRETFS DMNVSENQKV GGGNRAPTVL SHHLSLPTSS AELSAMEKLL 360 QFQDSVPCKI RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT NTADMLDLAV 420 DYIKDLQKQV KILSDSRVKC RCSNEHRP

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MDSDFGFRGE ECSDDSQQVQ QQQPIRNSGL VRYRSAPSSY FARLVNTGGG GGGENCDQFV  60
NPRPSSPETD QIFAGFMSCG GTQDSTPHNL CDIGQNSSAN EAFQPQFVAN LKEETDIFHH  120
HHHDEQQHNS GYSSASVSAS ASASQIIYQN QSQDTQPNHN SVASNSGMDN SCGVANSMRT  180
KLSGGAGSSN SNLIRHSSSP AGLFSHINNE NGYDVMRGMG NFGGGNGTNA EAWLPSPSRL  240
KRQMAFSSGP PSCSGPMAPI SENGSKCMEI SGPEHESFCE DHRNDRGYIA GFPIGSWDDS  300
AILSNSFLKR LEDDDRETFS DMNVSENQKV GGGNRAPTVL SHHLSLPTSS AELSAMEKLL  360
QFQDSVPCKI RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT NTADMLDLAV  420
DYIKDLQKQV KILSDSRVKC RCSNEHRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	3e-60	bHLH family protein