PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028101343.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 349aa    MW: 38850.9 Da    PI: 6.2453
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028101343.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10261308454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL +A++ + +L
  XP_028101343.1 261 SKACREKLRRDRLNDKFVELGSILEPG---RPPKTDKAAILVEAIRLVIQL 308
                     6789**********************8...89*************987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MPESERERSI LLFCFSVAIL VPAVVVVSQI QSQEEGFICS TNMATLGGIH DSHSSNQNTA  60
DIDNLSRFAI QEHNKKENTL FEFVRVVKAQ EQVVAGTLHH ITLEAVDAGK KKLYEAKVWV  120
KPWMNFKELQ EFKHAGDVGD TPALTPSDLS VKKDGHSPGW QAVPTHDPVV HDAAHHELSG  180
DLSDMVSPEH TNWLFDYGLI EDISVPDPNF SAPTSGFCWP LNASSNIGLE IDGSFGDSDS  240
RKETGSKKRP RPELCGASSS SKACREKLRR DRLNDKFVEL GSILEPGRPP KTDKAAILVE  300
AIRLVIQLRG DAQKLKDSNL TLQEKIKELK AEKNELRDEK QRLKAEKER
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248252KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-63bHLH family protein