PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101464.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 195aa MW: 22153.8 Da PI: 10.1232

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.4e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l ++++ +G + Wkt+a + g++R++k+c++rw++yl XP_028101464.1 17 KGAWTSEEDRKLTQYIEVHGAKKWKTVATKSGLNRCGKSCRLRWLNYL 64 79********************************************97 PP
2	Myb_DNA-binding	54.2	3.2e-17	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l XP_028101464.1 70 RGNISDEEEDLIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 115 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MAPRNVNNGA GRKVYNKGAW TSEEDRKLTQ YIEVHGAKKW KTVATKSGLN RCGKSCRLRW 60 LNYLRPNIKR GNISDEEEDL IVRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSHLNKKIN 120 KGKTTSTSTA QERTTPEAAA GVSEVEREGG GGSRNPEVTF NVNEFFDFST EGTNGLEWVN 180 KFLELDDGQW ISEKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	1e-53	MYB family protein