PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028101487.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 169aa    MW: 19156.6 Da    PI: 8.6684
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028101487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.97.4e-085170626
                    -SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  6 CrffartGtCkyGdrCkFaHg 26
                    C f+++ G C+yG++C++ H+
  XP_028101487.1 51 CTFYQK-GVCSYGSQCRYEHV 70
                    999999.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MEPPLSLSLS KILSLAFSRT RAPSPSAASF ATTPFTATAT NTDDYDYLLM CTFYQKGVCS  60
YGSQCRYEHV KVFRSQSSTE LAWQSNSSTS GMDANFTLRA CPICRKVSYF VIPSVIWYST  120
KEEKQEIVDS YKAKHREAGN TSFLTYSLLY GENYLGSWRN YLKLDFAPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-22C3H family protein