PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028101721.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GeBP
Protein Properties Length: 210aa    MW: 23569.3 Da    PI: 10.7155
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028101721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57353.95.1e-17121203284
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 
                     lfq+lw+eeDeiv+L+G i+++ k+g   s+    f+     +  +   + + ++K+rrL kK++++ +k+k gk+ +f++  
  XP_028101721.1 121 LFQSLWNEEDEIVILKGTIEYTVKKGLIHSQISMLFIISSIYRCTLMLARPNCLKKVRRLNKKYENNASKSKMGKDRTFRSLM 203
                     79************************9766644455555556677889999**************************998755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MANNGLPELE PSSKKLVIAQ TSTPNPQSSF KDDSSSKSDT SPTNPRIKPL ASKPMGEDPP  60
KVTNKPRSKL GSAKFPMKRL AASENNSNQE SKMAKKKVVD SDIVIQKDSA KKTGDDTKKQ  120
LFQSLWNEED EIVILKGTIE YTVKKGLIHS QISMLFIISS IYRCTLMLAR PNCLKKVRRL  180
NKKYENNASK SKMGKDRTFR SLMSKKRMNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.13e-12GeBP family protein