PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101879.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 513aa MW: 58350.2 Da PI: 7.2592

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.1	6.8e-18	9	99	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ffk++ + s+ l lp kfa++ ++ +++ +led sg++W+v+l +k++g+ +++GW F ++gL+ gDfv+F+++++s f vv++ XP_028101879.1 9 FFKIM--IGDHFSKVLFLPPKFAQTLsDL---IDQKTQLEDASGQRWTVTL--SKYDGSLAFQQGWPAFSLEHGLEIGDFVLFHYIEQSHF--VVQI 96 67777..334444569*****888544...45689**********..*******************************98999..9999 PP E-S CS B3 97 frk 99 + k XP_028101879.1 97 YGK 99 876 PP
2	B3	38.2	2.6e-12	447	502	31	90
.--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 e+++ ++l+d+ +r W v + k+g vl++GW+ F+kan++++gD + F+ ++ f XP_028101879.1 447 ERKVLVRLRDPVSRLWPVIY--HEKQGIKVLGSGWEAFCKANRIQVGDECAFEIED--VF 502 46789*************..9999999**********************644..44 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MGWPVATSFF KIMIGDHFSK VLFLPPKFAQ TLSDLIDQKT QLEDASGQRW TVTLSKYDGS 60 LAFQQGWPAF SLEHGLEIGD FVLFHYIEQS HFVVQIYGKS GCEKLYFSKE NSNQKKRTRA 120 NRDSSAKDEQ CHTINVSINS MNKEGSNTSA VSGSESEISR RLPMATTYTT SNIDNINERL 180 HNVPRTKCIE EPFYMIDRDS GVGQVDRLSS LYDLADFEMQ RTPSVDGPKE VLVEDVRPLS 240 HVNTMPQSQA EAEIVDKLPV TEEVVSQTTL SDVPNLPILE KNEFQMMDNV SNQDYGNGNT 300 SGRERRSKTR YSSNKALISQ KDTSLMERCQ SMQQKFADVS KFCEFPASVQ TWNCQSGERM 360 KVVKKEQVEM RARKMMHGKY PEIKECDRSS SPSMKDNDHV YKVVKTEHAT STLSVKVPFL 420 AVPGRLSFLE LPSCLPSVSF RGRPIMERKV LVRLRDPVSR LWPVIYHEKQ GIKVLGSGWE 480 AFCKANRIQV GDECAFEIED VFECIYKVSV DRK

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MGWPVATSFF KIMIGDHFSK VLFLPPKFAQ TLSDLIDQKT QLEDASGQRW TVTLSKYDGS  60
LAFQQGWPAF SLEHGLEIGD FVLFHYIEQS HFVVQIYGKS GCEKLYFSKE NSNQKKRTRA  120
NRDSSAKDEQ CHTINVSINS MNKEGSNTSA VSGSESEISR RLPMATTYTT SNIDNINERL  180
HNVPRTKCIE EPFYMIDRDS GVGQVDRLSS LYDLADFEMQ RTPSVDGPKE VLVEDVRPLS  240
HVNTMPQSQA EAEIVDKLPV TEEVVSQTTL SDVPNLPILE KNEFQMMDNV SNQDYGNGNT  300
SGRERRSKTR YSSNKALISQ KDTSLMERCQ SMQQKFADVS KFCEFPASVQ TWNCQSGERM  360
KVVKKEQVEM RARKMMHGKY PEIKECDRSS SPSMKDNDHV YKVVKTEHAT STLSVKVPFL  420
AVPGRLSFLE LPSCLPSVSF RGRPIMERKV LVRLRDPVSR LWPVIYHEKQ GIKVLGSGWE  480
AFCKANRIQV GDECAFEIED VFECIYKVSV DRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	3e-13	B3 family protein