PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028101956.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GeBP
Protein Properties Length: 224aa    MW: 25404.2 Da    PI: 10.6867
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028101956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57338.23.9e-1245129598
          DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                      l++e+Dei lL++l       +k +s+ +      +++ i  ++s+ q+++K+rrL+++++k  ++     +  ++++ d+ki+e+ +kiWg+
  XP_028101956.1  45 VLFTEQDEIHLLKALKRA----NKLSSSAVASPPPPLSGVIGGDFSDVQITDKLRRLRQRYHKLART-----KSLMKTPRDRKIYEMGRKIWGK 129
                     46************9544....33456677778889999***********************99998.....67899***************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSTITTTNQI FASSRRRKPY SASATAAESP ENPTLAASKS PSRRVLFTEQ DEIHLLKALK  60
RANKLSSSAV ASPPPPLSGV IGGDFSDVQI TDKLRRLRQR YHKLARTKSL MKTPRDRKIY  120
EMGRKIWGKK LKNSRRESKS VEDGGFEGEV DLSDFPALLR EVSGIFPENR VYREGLERLG  180
REKLMSLNEK WMVQRMEEAG LLAKKAELFY EQTKLELQSS VVSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.27e-07GeBP family protein