PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028101959.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 230aa    MW: 25296.2 Da    PI: 7.6588
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028101959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB178.56.2e-5625120297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk lP+nakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv +lkvyl+kyre+ege
  XP_028101959.1  25 KEQDRFLPIANVSRIMKKSLPTNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGTLKVYLNKYRETEGE 119
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_028101959.1 120 K 120
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MTGKRSQTSP IGSPSSGNIS DSSSKEQDRF LPIANVSRIM KKSLPTNAKI SKEAKETVQE  60
CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE NYVGTLKVYL NKYRETEGEK  120
NSMARQEDQT YPSYINTNPS GVSEISKVIT NSMSSRVDLL ESFNHEEYYG VGVGAQVSGK  180
SHGDRGRVIV SGYGENLVSN GGFNMGKIHE LGDGNAKRAM ATHLHHGVEW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-62NF-YB family protein