PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102019.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 649aa    MW: 74201.5 Da    PI: 6.2439
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3469.3e-1547136197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv +p+  + ++ l +p  f+++ +g    + +  l++ +g+ W v +  +k +++  +++GW +Fv++n +++g f+vF +dg+  f   +k
  XP_028102019.1  47 FFKVYLPPPKGPER-LPIPSAFVKHVKGA--IPDKAFLRNCHGKLWPVVV--TKVGNQLCFKDGWVKFVEDNSVEVGNFLVFDFDGNYVF--DFK 134
                     88999999988875.********777655..5668***************..*******************************9998766..555 PP

                     EE CS
              B3  96 vf 97 
                     +f
  XP_028102019.1 135 LF 136
                     55 PP
2B342.89.2e-145316081089
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     ++++  l++p + +++h++k   +  l+l de+gr+W+ ++  ++  gr++lt GWk F+k n+Lk  D ++ ++++   +
  XP_028102019.1 531 STRRTELYVPMDVIRDHNLK--LPSNLILLDEEGRKWSTRVVQWND-GRTWLTVGWKAFCKWNNLKWEDRCICEFIRGkGR 608
                     4566779**********998..6668***************77776.5789*********************999876344 PP
Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    
MLYISMQCTT PFLTPSNLSA FARVCARDLG LRLKLRRKKK MNNNLGFFKV YLPPPKGPER  60
LPIPSAFVKH VKGAIPDKAF LRNCHGKLWP VVVTKVGNQL CFKDGWVKFV EDNSVEVGNF  120
LVFDFDGNYV FDFKLFGRTE CEIKMIGSSG FKVKEEKEEE EEEEEKVKEE EEEEEEEEED  180
ELEANTLRKK TEKGKSEKST KGLKKIKQGT NCLINLDGNK GRVTIKDKGG NKRAYRTEVE  240
DEEGDELEAK TLRKKTEKGK SEKSTKGLKK INQGTNYGNK GKATIKDKGG NKRACRMEVE  300
DEEEETDDDD EEEDELEATT LRKKAEKGKS EKSTKGLKKI NQDGNKRKAT IKDKGGNKRA  360
YTMEVEEEEE ETDDDEEEEE DELEAKALRK KTENGIGEKS TKGLKKINQG TSYGNKGKAT  420
IKDKGGNKRA YTMEVEEEEE EETDDDDDEE DELEAKILRK KTEKEKSEKS AKGLEKISQG  480
TSYGNKGKDT IKGEGGNKRA DTIAVEDDED VFKYGMVSWP KNPCFVAKLR STRRTELYVP  540
MDVIRDHNLK LPSNLILLDE EGRKWSTRVV QWNDGRTWLT VGWKAFCKWN NLKWEDRCIC  600
EFIRGKGRRG IFIKTCILRA GSWLPKKDSI LSSDHQDQVD KRHFQGSPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203208LKKIKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-14B3 family protein