PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102053.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 485aa MW: 53696 Da PI: 5.4547

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.9	5.4e-29	259	310	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGG AtPk +l+lm+v+ Lt++hvkSHLQkYR+ XP_028102053.1 259 KTRMRWTPELHEAFVEAVNKLGG---ATPKGVLKLMNVETLTIYHVKSHLQKYRT 310 68*****************99...89************************8 PP
2	Myb_DNA-binding	59.2	8.9e-19	261	309	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +++t +++ks++qky+ XP_028102053.1 261 RMRWTPELHEAFVEAVNKLGGATPKGVLKLMNvETLTIYHVKSHLQKYR 309 89**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MDVRPALFIR RSSEKQLTNM GFSGAISSSF PVFPTPLEEN YPKFTDSFQV SSERELMMNS 60 ISPQPTPLDS NSGTVGNLFS SASGFSTDVH FSSVSPQARC FHNSPFISQS SSDGASLPPI 120 HSSHSGLHST QLINYPEGNN DMSWTTDLLQ DFLDFPENIP VQNGQVETIT GVMASQEHVK 180 RTDWQEWAHQ SISVDDALDL DSNWSDIPDD ISAPDPKPKV IEPPTDVFAH QPQVHLHHPI 240 PSGEICPVAS PLSLATQNKT RMRWTPELHE AFVEAVNKLG GATPKGVLKL MNVETLTIYH 300 VKSHLQKYRT ARYKPESSEG MSERNLTPIE EITSLDLKAS MGITEALRVQ MEVQKQLHEQ 360 LEIQRKLQLR IEEQGRNLQM MFEKQKKMED VRMKASSSNP NVPSPLPSTV QQPSLADENL 420 EASKQDKIVR TTGSGEMSAS TAREEISQDS SEKQTPDPVT RGSSPRPLKR ARGDETAASS 480 AKLAS

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MDVRPALFIR RSSEKQLTNM GFSGAISSSF PVFPTPLEEN YPKFTDSFQV SSERELMMNS  60
ISPQPTPLDS NSGTVGNLFS SASGFSTDVH FSSVSPQARC FHNSPFISQS SSDGASLPPI  120
HSSHSGLHST QLINYPEGNN DMSWTTDLLQ DFLDFPENIP VQNGQVETIT GVMASQEHVK  180
RTDWQEWAHQ SISVDDALDL DSNWSDIPDD ISAPDPKPKV IEPPTDVFAH QPQVHLHHPI  240
PSGEICPVAS PLSLATQNKT RMRWTPELHE AFVEAVNKLG GATPKGVLKL MNVETLTIYH  300
VKSHLQKYRT ARYKPESSEG MSERNLTPIE EITSLDLKAS MGITEALRVQ MEVQKQLHEQ  360
LEIQRKLQLR IEEQGRNLQM MFEKQKKMED VRMKASSSNP NVPSPLPSTV QQPSLADENL  420
EASKQDKIVR TTGSGEMSAS TAREEISQDS SEKQTPDPVT RGSSPRPLKR ARGDETAASS  480
AKLAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.1	5e-92	G2-like family protein