PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102083.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 338aa    MW: 37471.3 Da    PI: 8.2458
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-1191138455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h   Er RR+++++ f++L  ll ++     +K +K++i+ +Av +IksLq
  XP_028102083.1  91 THIWTERERRKKMRNMFSNLHALLSHL----PPKADKSTIVDEAVTHIKSLQ 138
                     78889*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MSDLGGGHEN FFWETQSWAF SNSDDLGCIG EKSGGKAPPD SGSNTQTPIG KQVEEVIAVA  60
LRKKRGGVGK NGKGCGGEAN EGKGGESDHE THIWTERERR KKMRNMFSNL HALLSHLPPK  120
ADKSTIVDEA VTHIKSLQQT LQKLQRQKPE RLHGLTPMNF DGQSSIITPQ KLPMDSREAF  180
MANQASSNNT NSNSSNALPV SLSRSPPLFQ TWTSPNVILN VCGDHAQISV CSMKKAGLFT  240
VICYMLEKHK LDVVSAHVSS DQNRTMYMIQ AHAKIAPDQL SEAFPLEEIY KQAAGEIMLE  300
KAKERIQQQE KHNIEEGAKE KNTKDRLSSE MTKLFYTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-41bHLH family protein