PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102170.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 280aa MW: 32474.9 Da PI: 7.6587

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	140.2	1.3e-43	11	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPt+eel+++yLkk + g++ ++i ++iy++ePw+Lp +k +e+ewyf ++rd+++ +g r+nr+t++g+Wkatg+d+ + + XP_028102170.1 11 LPGFRFHPTEEELLNYYLKKIAMGNNKLSLNIIGFLNIYHHEPWELPGLAKIGEREWYFIVPRDRRNGHGGRPNRITQNGFWKATGSDRLIRCLs 105 59*****************99999666699***********8888899********************************99875 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ gl+ktLvfykgrap+g ktdWvm+eyrl XP_028102170.1 106 dPTKILGLRKTLVFYKGRAPRGCKTDWVMNEYRL 139 56778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MDNKTTPELK LPGFRFHPTE EELLNYYLKK IAMGNNKLSL NIIGFLNIYH HEPWELPGLA 60 KIGEREWYFI VPRDRRNGHG GRPNRITQNG FWKATGSDRL IRCLSDPTKI LGLRKTLVFY 120 KGRAPRGCKT DWVMNEYRLP DNSSFPKEDI VLCKIYRKAT SLKVLEERAA IEEKSRILHQ 180 TPSSPRSQDS SDHPQESFVS LTVSQQDIVF KIEEEEEEEQ EIKNVSSSSS LGFGSMKEHL 240 TELEVPKFSM DHLTMDPLWS QLKSPWLGNW SPYYANVLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	3e-88	NAC family protein