PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102263.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 283aa MW: 31809.7 Da PI: 9.8109

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.1	3.7e-49	43	172	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptde l+++yLk k++g++ ++ +vi+e+d++k+ePwdL +++k++++ew+fF+++d+ky++g+r nrat gyWkatgkd ++ XP_028102263.1 43 LPVGYRFRPTDEVLINHYLKLKINGNEKQV-SVIREIDVCKCEPWDLLdkSAIKTNDEEWFFFCPKDRKYQNGHRLNRATVVGYWKATGKDSSIR 136 799**********************999.99**********64358889999********************************9 PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+kk Lvfy grap+g++t+Wv+heyr+ XP_028102263.1 137 SLrETTVIGMKKNLVFYAGRAPNGQRTNWVIHEYRA 172 9757778*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MSPSKILADE SLPVGYRLRP TNEKLINHYL MLKISGDEKQ ESLPVGYRFR PTDEVLINHY 60 LKLKINGNEK QVSVIREIDV CKCEPWDLLD KSAIKTNDEE WFFFCPKDRK YQNGHRLNRA 120 TVVGYWKATG KDSSIRSLRE TTVIGMKKNL VFYAGRAPNG QRTNWVIHEY RATRFLVTWE 180 ASPLLIFDST TNSSALASAS ASSTPPTACD RRLPLPCCRL RRRPRQNKPP SLSSPQLQLL 240 TSVAALPPTH HQSSIEEPPL VSAAVLISSA PVTLVVAIAE LAM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	225	RLRRRPR
2	220	226	LRRRPRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	6e-65	NAC family protein