PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102314.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 198aa    MW: 22980.3 Da    PI: 8.8507
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.95.2e-2641129189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYne+++ vGFs+r+++ +ksk++g +t+r+fvC +eg+re++k+  +  +++r+etrt+C+a +++  ++  +kw v+k++++HnH+l
  XP_028102314.1  41 EFYNEFGRIVGFSIRRNYCNKSKKDGVMTSRKFVCCNEGEREKDKRY-TVIKNPRSETRTNCNAFMHIVFKRnLSKWIVSKFDNNHNHPL 129
                     6*******************************************999.999****************9888769**************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEDGIMDDGG LEGCIKEMGK LAKDKSQYLG MEFPSEEVAY EFYNEFGRIV GFSIRRNYCN  60
KSKKDGVMTS RKFVCCNEGE REKDKRYTVI KNPRSETRTN CNAFMHIVFK RNLSKWIVSK  120
FDNNHNHPLH LPQCTHLMPS QRKVCDVQGI NIDIADETEI SLKASHDLIS VIVGGKEFVE  180
FTRKDQKTYL RAKRQRNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-24FAR1 family protein