PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102463.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 208aa MW: 24414.3 Da PI: 8.0718

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.9	5.4e-13	30	107	2	80
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 W+ qe l+Li+ +e++ r++ ++W+ + +++ + + r+ +qC+ kw++l +ykkik +e+++ s+++s ++ XP_028102463.1 30 WSSQESLTLITEIAAVEHDCRNTLFSFQKWKIIVENCNSLEVFRTLNQCRRKWDSLLSDYKKIKLWESSE-SQVESYWS 107 ********************************************************************96.66666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MSMDEQEDHG GRHSRASASR RTRSQVAPDW SSQESLTLIT EIAAVEHDCR NTLFSFQKWK 60 IIVENCNSLE VFRTLNQCRR KWDSLLSDYK KIKLWESSES QVESYWSIDY ERRREFGFPE 120 DFDFEVFKAI DDHLKVGDGS DTDPDVDPEA VADGVAKPDL KKQRRRVMPQ KRSTEERVTP 180 QKRKINKKIM PEQGRVEKKG KAFETQQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	201	KKQRRRVMPQKRSTEERVTPQKRKINKKIMPEQGRVEKKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	4e-46	Trihelix family protein