PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102610.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 234aa    MW: 26201.8 Da    PI: 8.9142
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.72.5e-07197219123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y C +Cgk F+r  nL+ H+r H
  XP_028102610.1 197 YFCMICGKGFKRDANLRMHMRGH 219
                     78*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MPEFRRRFGA LAVELVFRRD GRKAGGRCCG GVAEATEEET LVTRCRERER RERERNEMCD  60
SSRIQDWDPR AMLNNLSFVE QKIHQLQDLV HLVVSRRGQV VTRSDELVSQ QQQLITADLA  120
SIIVQLISIA GSLLPSVKQT RYTNPSITQF GQLGGVIFPS GPNLNGSAVQ QNIGGRKVSD  180
QSNHVDLAGS CKIEQNYFCM ICGKGFKRDA NLRMHMRGHG DEYKTPAARN VAAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.28e-55C2H2 family protein