PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102618.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 274aa MW: 29318.7 Da PI: 7.9819

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.7	6.5e-11	68	116	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++++h+e+E rRR+riN +++Lr+llP+ K +Ka+ L ++v+ +++L XP_028102618.1 68 KKKSHSEAESRRRKRINGHLATLRTLLPNT-----IKTDKASLLAEVVRRLREL 116 789************************8.....69********9999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MYSMNPSYYE LGSCSSNSVK FHLEGGGGGG VVSSNSTNMA NSMSMVRWSS LRSTAEEEEK 60 GVGGGGSKKK SHSEAESRRR KRINGHLATL RTLLPNTIKT DKASLLAEVV RRLRELKKTT 120 TELTRADSTS TTSDNGSGQS GGSAKEHHNM LPSEADELEL CYCEEEGDSA AGTIKATMSC 180 EDRPELVSDM TRAVRSVEGK VVRAEMATVG GRTKSVLWVQ VSGDSGGSDG DSSGGERLEM 240 LGRALKMVVD RASLSMSGPG QDLPGNKRPR LYHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	72	KKKSH
2	68	82	KKKSHSEAESRRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	5e-20	bHLH family protein