PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102672.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 661aa MW: 76730.7 Da PI: 7.7698

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.8	8.7e-14	48	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk++GF + ++++ ++g+++ C++ kr+++++ + +++ ++ ++Ckak++ +++kdg++++t+ +leH+H+l XP_028102672.1 48 SFYAKYAKHLGFAIAYRTQNIG-QDGKVKYFGIECTRARKRTKRSEV--HPLEPSLSSFIECKAKVRATLQKDGRFKLTTAVLEHTHDLI 134 5***********99988876.8888***********99877..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MDIDSNNPSI NGTEEVEEVE NNPSLNEIGE VEQPKKGMCF NSKQEVYSFY AKYAKHLGFA 60 IAYRTQNIGQ DGKVKYFGIE CTRARKRTKR SEVHPLEPSL SSFIECKAKV RATLQKDGRF 120 KLTTAVLEHT HDLIPTDSRH FAMNKRIVTP VKRRLEINDE AGIGVAKNFH SIVVEAGGYE 180 ALTFDERDAR NHIEIMRRLR LGVGDAESIA LYFHRMQQQN SNFYSAIDLD EDGRMRNLFW 240 ADARSRGVYK AFGDVVSFDT TYLTNKYDMP FAPFVGVNHH GQSILLGCGL LSNENTETFV 300 WLFKEWLSCM SDAPPKAIIT DQCKAMQNAI EVVFPQARHR WCLWHIMKKI PEKLRGYAQY 360 ESIKFALQNA VYDSFTKDEF DEEWQAMIAK FNLHDNDWLG VLYSERHRWI PAYVKDVFWA 420 GMSTTQRSES MNAFFDGYVN SKTTLKQFVE QYDNALRSKV EKEMKADFKS RNKLYDCLTM 480 YEFEKQFRAV YTNAKFKEVQ VELKRLLYCR ANLVKEEGAI CTYHVKEAIL VGEKMKTVEC 540 VVYFNTSECE MQCMCQWFEF RGIMCAYAIT VLLERCIYHV PDKYIVSRWR KDIERGYTCI 600 LTTYTKAGAV VNAKLHDKYH KMLDEILEIA ANDNGKHQVL DLGLIEIKDR VRKDQSSSAI 660 R

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MDIDSNNPSI NGTEEVEEVE NNPSLNEIGE VEQPKKGMCF NSKQEVYSFY AKYAKHLGFA  60
IAYRTQNIGQ DGKVKYFGIE CTRARKRTKR SEVHPLEPSL SSFIECKAKV RATLQKDGRF  120
KLTTAVLEHT HDLIPTDSRH FAMNKRIVTP VKRRLEINDE AGIGVAKNFH SIVVEAGGYE  180
ALTFDERDAR NHIEIMRRLR LGVGDAESIA LYFHRMQQQN SNFYSAIDLD EDGRMRNLFW  240
ADARSRGVYK AFGDVVSFDT TYLTNKYDMP FAPFVGVNHH GQSILLGCGL LSNENTETFV  300
WLFKEWLSCM SDAPPKAIIT DQCKAMQNAI EVVFPQARHR WCLWHIMKKI PEKLRGYAQY  360
ESIKFALQNA VYDSFTKDEF DEEWQAMIAK FNLHDNDWLG VLYSERHRWI PAYVKDVFWA  420
GMSTTQRSES MNAFFDGYVN SKTTLKQFVE QYDNALRSKV EKEMKADFKS RNKLYDCLTM  480
YEFEKQFRAV YTNAKFKEVQ VELKRLLYCR ANLVKEEGAI CTYHVKEAIL VGEKMKTVEC  540
VVYFNTSECE MQCMCQWFEF RGIMCAYAIT VLLERCIYHV PDKYIVSRWR KDIERGYTCI  600
LTTYTKAGAV VNAKLHDKYH KMLDEILEIA ANDNGKHQVL DLGLIEIKDR VRKDQSSSAI  660
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-125	FAR1 family protein